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Solyc01g008340.2.1 protein (Solanum lycopersicum) - STRING interaction network
"Solyc01g008340.2.1" - Putative L19 ribosomal protein in Solanum lycopersicum
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Solyc01g008340.2.1Putative L19 ribosomal protein (250 aa)    
Predicted Functional Partners:
Solyc08g067950.2.1
Uncharacterized protein (160 aa)
   
  0.994
Solyc06g082760.2.1
Uncharacterized protein (203 aa)
   
  0.994
Solyc06g082750.2.1
Uncharacterized protein (203 aa)
   
  0.994
Solyc11g021130.1.1
Ribosomal protein S7 (285 aa)
     
 
  0.994
rps3
30S ribosomal protein S3, chloroplastic (352 aa)
     
  0.992
Solyc00g026870.1.1
Annotation not available (465 aa)
   
  0.991
Solyc12g014390.1.1
Uncharacterized protein (229 aa)
   
  0.989
Solyc09g092090.2.1
Uncharacterized protein (204 aa)
   
  0.989
Solyc07g062190.2.1
Uncharacterized protein (233 aa)
   
  0.989
Solyc12g013990.1.1
Uncharacterized protein (398 aa)
   
  0.987
Your Current Organism:
Solanum lycopersicum
NCBI taxonomy Id: 4081
Other names: Lycopersicon, Lycopersicon (Mill.) Seithe, Lycopersicon esculentum, Lycopersicon esculentum Mill., Lycopersicon esculentum var. esculentum, Lycopersicon lycopersicum, S. lycopersicum, Solanum esculentum, Solanum esculentum Dunal, Solanum lycopersicum, Solanum lycopersicum L., tomato
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