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  • 11.0 (preview - - version 10.5 still available here)
STRINGSTRING
Solyc01g008420.2.1 protein (Solanum lycopersicum) - STRING interaction network
"Solyc01g008420.2.1" - annotation not available in Solanum lycopersicum
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Solyc01g008420.2.1annotation not available (536 aa)    
Predicted Functional Partners:
ASS
Arginosuccinate synthase family (494 aa)
         
  0.648
101263182
C2H2 and C2HC zinc fingers superfamily protein (384 aa)
           
  0.597
Solyc11g017140.1.1
annotation not available (485 aa)
           
  0.569
Solyc06g065440.1.1
annotation not available (351 aa)
           
  0.569
Solyc11g071350.1.1
annotation not available (448 aa)
       
 
  0.539
HO2
Heme oxygenase 2 (368 aa)
           
  0.519
101259076
Bidirectional sugar transporter SWEET; Mediates both low-affinity uptake and efflux of sugar across the membrane (286 aa)
           
  0.517
101253139
Uncharacterized protein; Calmodulin-related (319 aa)
           
  0.483
Solyc07g054710.1.1
annotation not available (94 aa)
           
  0.461
PIN6
Auxin efflux carrier component; May act as a component of the auxin efflux carrier (520 aa)
       
 
  0.459
Your Current Organism:
Solanum lycopersicum
NCBI taxonomy Id: 4081
Other names: Lycopersicon esculentum, Lycopersicon esculentum Mill., Lycopersicon esculentum var. esculentum, S. lycopersicum, Solanum esculentum, Solanum esculentum Dunal, Solanum lycopersicum, Solanum lycopersicum L., tomato
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