STRINGSTRING
Solyc01g008520.2.1 protein (Solanum lycopersicum) - STRING interaction network
"Solyc01g008520.2.1" - Uncharacterized protein in Solanum lycopersicum
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Solyc01g008520.2.1Uncharacterized protein (338 aa)    
Predicted Functional Partners:
Solyc11g072610.1.1
Uncharacterized protein (371 aa)
       
  0.871
Solyc11g073220.1.1
Uncharacterized protein (311 aa)
       
  0.866
RAD51
DNA repair protein RAD51 homolog ; Binds to single and double-stranded DNA and exhibits DNA-dependent ATPase activity. Underwinds duplex DNA (By similarity) (342 aa)
       
  0.857
Solyc10g079250.1.1
Putative recA protein (395 aa)
       
  0.852
Solyc07g066320.2.1
Uncharacterized protein (419 aa)
       
  0.852
Solyc05g055780.2.1
Uncharacterized protein (418 aa)
       
  0.852
Solyc07g055170.1.1
Uncharacterized protein (285 aa)
     
  0.819
Solyc09g082790.2.1
Uncharacterized protein (334 aa)
     
  0.793
Solyc05g050960.2.1
Uncharacterized protein (213 aa)
     
  0.793
Solyc05g050950.2.1
Uncharacterized protein (123 aa)
     
  0.793
Your Current Organism:
Solanum lycopersicum
NCBI taxonomy Id: 4081
Other names: Lycopersicon, Lycopersicon (Mill.) Seithe, Lycopersicon esculentum, Lycopersicon esculentum Mill., Lycopersicon esculentum var. esculentum, Lycopersicon lycopersicum, S. lycopersicum, Solanum esculentum, Solanum esculentum Dunal, Solanum lycopersicum, Solanum lycopersicum L., tomato
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