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AUREA protein (Solanum lycopersicum) - STRING interaction network
"AUREA" - Phytochromobilin synthase in Solanum lycopersicum
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Edges represent protein-protein associations
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Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AUREAPhytochromobilin synthase (342 aa)    
Predicted Functional Partners:
HO1
Heme oxygenase 1 (278 aa)
       
  0.978
HO2
Heme oxygenase 2 (368 aa)
   
 
  0.942
phyA
Phytochrome ; Regulatory photoreceptor which exists in two forms that are reversibly interconvertible by light- the Pr form that absorbs maximally in the red region of the spectrum and the Pfr form that absorbs maximally in the far-red region (1123 aa)
           
  0.929
det2
Steroid 5 alpha reductase DET2 ; Involved in a reduction step in the biosynthesis of the plant steroid, brassinolide. Can use progesterone, testosterone, androstenedione and campestenone as substrate (257 aa)
           
  0.697
Solyc03g079850.2.1
Guanylyl cyclase (275 aa)
           
  0.694
HY5
Transcription factor HY5 ; Transcription factor that promotes photomorphogenesis in the light and positively regulates fruit pigmentation and fruit nutritional quality. Probably acts downstream of the light receptor network and directly affects transcription of light- induced genes (158 aa)
           
  0.691
LOC543967
Glutamate-1-semialdehyde 2,1-aminomutase, chloroplastic (482 aa)
           
  0.691
psaD
Photosystem I reaction center subunit II, chloroplastic ; PsaD can form complexes with ferredoxin and ferredoxin- oxidoreductase in photosystem I (PS I) reaction center. PSAD may encode the ferredoxin-docking protein (208 aa)
           
  0.690
Solyc01g103920.2.1
Uncharacterized protein (140 aa)
       
      0.683
Solyc12g095900.1.1
Uncharacterized protein (722 aa)
       
 
  0.603
Your Current Organism:
Solanum lycopersicum
NCBI taxonomy Id: 4081
Other names: Lycopersicon, Lycopersicon (Mill.) Seithe, Lycopersicon esculentum, Lycopersicon esculentum Mill., Lycopersicon esculentum var. esculentum, Lycopersicon lycopersicum, S. lycopersicum, Solanum esculentum, Solanum esculentum Dunal, Solanum lycopersicum, Solanum lycopersicum L., tomato
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