STRINGSTRING
AGO4A protein (Solanum lycopersicum) - STRING interaction network
"AGO4A" - annotation not available in Solanum lycopersicum
Nodes:
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AGO4Aannotation not available (909 aa)    
Predicted Functional Partners:
RPE1
DNA-directed RNA polymerase subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates (1678 aa)
     
 
  0.830
DCL1
Uncharacterized protein; Dicer-like 1; Belongs to the helicase family. Dicer subfamily (1888 aa)
     
 
  0.773
Solyc11g008150.1.1
Uncharacterized protein; Kow domain-containing transcription factor 1 (1509 aa)
       
 
  0.748
101250389
RNA-dependent RNA polymerase; Probably involved in the RNA silencing pathway and required for the generation of small interfering RNAs (siRNAs) (1119 aa)
     
   
  0.706
DCL4
Uncharacterized protein; Dicer-like 4; Belongs to the helicase family. Dicer subfamily (1536 aa)
     
 
  0.705
101259606
dsRNA-binding protein 2 (414 aa)
       
 
  0.660
DCL
Protein DCL, chloroplastic; Has a function in the early stage of chloroplast development and palisade cell morphogenesis. Required for correct plastid ribosome assembly. Required for processing and maturation of 4.5S rRNA (224 aa)
           
  0.660
Solyc07g007210.2.1
annotation not available (925 aa)
     
      0.640
Solyc11g008570.1.1
Uncharacterized protein; Calcineurin-like metallo-phosphoesterase superfamily protein (691 aa)
     
 
  0.634
SAHH
Adenosylhomocysteinase; Adenosylhomocysteine is a competitive inhibitor of S- adenosyl-L-methionine-dependent methyl transferase reactions; therefore adenosylhomocysteinase may play a key role in the control of methylations via regulation of the intracellular concentration of adenosylhomocysteine (485 aa)
           
  0.624
Your Current Organism:
Solanum lycopersicum
NCBI taxonomy Id: 4081
Other names: Lycopersicon esculentum, Lycopersicon esculentum Mill., Lycopersicon esculentum var. esculentum, S. lycopersicum, Solanum esculentum, Solanum esculentum Dunal, Solanum lycopersicum, Solanum lycopersicum L., tomato
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