STRINGSTRING
Solyc01g009310.2.1 protein (Solanum lycopersicum) - STRING interaction network
"Solyc01g009310.2.1" - Uncharacterized protein in Solanum lycopersicum
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Solyc01g009310.2.1Uncharacterized protein (434 aa)    
Predicted Functional Partners:
Solyc02g086180.2.1
Uncharacterized protein (271 aa)
     
  0.980
Solyc02g063240.2.1
Uncharacterized protein (271 aa)
     
  0.980
Solyc02g086190.1.1
Uncharacterized protein (257 aa)
     
  0.978
DWF1
DWARF1/DIMINUTO (568 aa)
     
 
  0.949
Solyc02g069490.2.1
Delta(24)-sterol reductase-like (579 aa)
     
 
  0.939
Solyc05g053750.1.1
Lipase (398 aa)
         
  0.901
Solyc03g005020.2.1
Lipase (405 aa)
         
  0.901
Solyc02g094040.2.1
Lipase (403 aa)
         
  0.901
Solyc02g068070.2.1
Lipase (418 aa)
         
  0.901
Solyc10g079770.1.1
Uncharacterized protein (445 aa)
         
    0.900
Your Current Organism:
Solanum lycopersicum
NCBI taxonomy Id: 4081
Other names: Lycopersicon, Lycopersicon (Mill.) Seithe, Lycopersicon esculentum, Lycopersicon esculentum Mill., Lycopersicon esculentum var. esculentum, Lycopersicon lycopersicum, S. lycopersicum, Solanum esculentum, Solanum esculentum Dunal, Solanum lycopersicum, Solanum lycopersicum L., tomato
Server load: low (18%) [HD]