STRINGSTRING
101245388 protein (Solanum lycopersicum) - STRING interaction network
"101245388" - annotation not available in Solanum lycopersicum
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
101245388annotation not available (175 aa)    
Predicted Functional Partners:
101249096
Mitochondrial 28S ribosomal protein S29-related (452 aa)
     
 
  0.938
Solyc11g021130.1.1
annotation not available (285 aa)
     
 
  0.879
Solyc04g049260.1.1
annotation not available (166 aa)
     
 
  0.879
Solyc03g114050.2.1
Ribosomal protein L29 family protein (182 aa)
     
      0.841
101251434
Ribosomal protein S5 family protein; Belongs to the universal ribosomal protein uS5 family (502 aa)
     
      0.837
rps16
30S ribosomal protein S16 (132 aa)
     
 
  0.821
101250331
Ribosomal L5P family protein (265 aa)
     
      0.818
Solyc08g006840.2.1
annotation not available (327 aa)
     
      0.808
101261898
annotation not available (305 aa)
     
 
  0.806
Solyc10g047150.1.1
annotation not available (64 aa)
     
 
  0.806
Your Current Organism:
Solanum lycopersicum
NCBI taxonomy Id: 4081
Other names: Lycopersicon esculentum, Lycopersicon esculentum Mill., Lycopersicon esculentum var. esculentum, S. lycopersicum, Solanum esculentum, Solanum esculentum Dunal, Solanum lycopersicum, Solanum lycopersicum L., tomato
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