STRINGSTRING
Solyc01g009590.2.1 protein (Solanum lycopersicum) - STRING interaction network
"Solyc01g009590.2.1" - Protein 108 in Solanum lycopersicum
Nodes:
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Solyc01g009590.2.1Protein 108 (102 aa)    
Predicted Functional Partners:
Solyc03g059200.1.1
Uncharacterized protein (263 aa)
     
   
  0.435
Solyc08g062780.1.1
Uncharacterized protein (596 aa)
     
   
  0.431
Solyc07g053460.2.1
Uncharacterized protein (342 aa)
     
   
  0.431
Solyc04g008420.1.1
Uncharacterized protein (678 aa)
     
   
  0.419
Solyc01g081100.1.1
Uncharacterized protein (473 aa)
     
   
  0.412
Your Current Organism:
Solanum lycopersicum
NCBI taxonomy Id: 4081
Other names: Lycopersicon, Lycopersicon (Mill.) Seithe, Lycopersicon esculentum, Lycopersicon esculentum Mill., Lycopersicon esculentum var. esculentum, Lycopersicon lycopersicum, S. lycopersicum, Solanum esculentum, Solanum esculentum Dunal, Solanum lycopersicum, Solanum lycopersicum L., tomato
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