STRINGSTRING
Solyc01g009620.2.1 protein (Solanum lycopersicum) - STRING interaction network
"Solyc01g009620.2.1" - Uncharacterized protein in Solanum lycopersicum
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Solyc01g009620.2.1Uncharacterized protein (200 aa)    
Predicted Functional Partners:
Solyc02g070240.2.1
Uncharacterized protein (671 aa)
     
  0.993
Solyc02g021760.2.1
Uncharacterized protein (689 aa)
     
  0.993
Solyc07g005320.2.1
Uncharacterized protein (1380 aa)
       
  0.984
Solyc12g099280.1.1
Uncharacterized protein (1130 aa)
       
  0.966
cdc2A-1
Cyclin-dependent protein kinase p34cdc2 (294 aa)
     
      0.954
Solyc02g062680.2.1
Anaphase-promoting complex subunit 10 ; Component of the anaphase promoting complex/cyclosome (APC/C), a cell cycle-regulated E3 ubiquitin-protein ligase complex that controls progression through mitosis and the G1 phase of the cell cycle (191 aa)
       
      0.953
Solyc05g013970.2.1
Uncharacterized protein (534 aa)
     
  0.935
Solyc11g070140.1.1
Uncharacterized protein (294 aa)
     
      0.919
Solyc05g051410.2.1
Uncharacterized protein (344 aa)
       
      0.898
Solyc04g076040.2.1
Uncharacterized protein (355 aa)
       
      0.898
Your Current Organism:
Solanum lycopersicum
NCBI taxonomy Id: 4081
Other names: Lycopersicon, Lycopersicon (Mill.) Seithe, Lycopersicon esculentum, Lycopersicon esculentum Mill., Lycopersicon esculentum var. esculentum, Lycopersicon lycopersicum, S. lycopersicum, Solanum esculentum, Solanum esculentum Dunal, Solanum lycopersicum, Solanum lycopersicum L., tomato
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