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101265569 protein (Solanum lycopersicum) - STRING interaction network
"101265569" - Hydroxyproline-rich glycoprotein family protein in Solanum lycopersicum
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
101265569Hydroxyproline-rich glycoprotein family protein (632 aa)    
Predicted Functional Partners:
Solyc12g098780.1.1
Uncharacterized protein; Extensin (Class I) (554 aa)
           
  0.533
Solyc12g038860.1.1
annotation not available (95 aa)
           
  0.533
Solyc12g038700.1.1
annotation not available (246 aa)
           
  0.533
101248197
annotation not available (540 aa)
           
  0.400
Solyc05g005460.2.1
DC1 domain-containing protein (581 aa)
           
  0.400
Your Current Organism:
Solanum lycopersicum
NCBI taxonomy Id: 4081
Other names: Lycopersicon esculentum, Lycopersicon esculentum Mill., Lycopersicon esculentum var. esculentum, S. lycopersicum, Solanum esculentum, Solanum esculentum Dunal, Solanum lycopersicum, Solanum lycopersicum L., tomato
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