STRINGSTRING
Solyc01g010490.2.1 protein (Solanum lycopersicum) - STRING interaction network
"Solyc01g010490.2.1" - Uncharacterized protein in Solanum lycopersicum
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Solyc01g010490.2.1Uncharacterized protein (504 aa)    
Predicted Functional Partners:
Solyc10g007930.2.1
Uncharacterized protein (390 aa)
   
     
  0.659
Solyc10g007900.2.1
Uncharacterized protein (390 aa)
   
     
  0.659
SD1
Sterol 22-desaturase ; Required to form the C-22 double bond in the sterol side chain. Possesses in vitro C-22 desaturase activity toward beta- sitosterol to produce stigmasterol. No activity with 24-epi- campesterol (501 aa)
   
     
  0.573
Solyc11g068430.1.1
Putative ferredoxin (124 aa)
     
  0.570
Solyc11g065640.1.1
Uncharacterized protein (216 aa)
     
  0.570
Solyc11g006910.1.1
Uncharacterized protein (125 aa)
     
  0.570
Solyc10g075160.1.1
Ferredoxin II (144 aa)
     
  0.570
SEND33
Ferredoxin-1, chloroplastic ; Ferredoxins are iron-sulfur proteins that transfer electrons in a wide variety of metabolic reactions (144 aa)
     
  0.570
Solyc08g083360.2.1
Uncharacterized protein (192 aa)
     
  0.570
Solyc08g077050.2.1
Uncharacterized protein (191 aa)
     
  0.570
Your Current Organism:
Solanum lycopersicum
NCBI taxonomy Id: 4081
Other names: Lycopersicon, Lycopersicon (Mill.) Seithe, Lycopersicon esculentum, Lycopersicon esculentum Mill., Lycopersicon esculentum var. esculentum, Lycopersicon lycopersicum, S. lycopersicum, Solanum esculentum, Solanum esculentum Dunal, Solanum lycopersicum, Solanum lycopersicum L., tomato
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