STRINGSTRING
Solyc01g010590.2.1 protein (Solanum lycopersicum) - STRING interaction network
"Solyc01g010590.2.1" - Peptidyl-prolyl cis-trans isomerase in Solanum lycopersicum
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Solyc01g010590.2.1Peptidyl-prolyl cis-trans isomerase ; PPIases accelerate the folding of proteins. It catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides (228 aa)    
Predicted Functional Partners:
Solyc12g035360.1.1
Uncharacterized protein (333 aa)
     
      0.906
Solyc02g083940.2.1
Uncharacterized protein (332 aa)
     
      0.906
Solyc01g087500.2.1
DNA topoisomerase 2 ; Control of topological states of DNA by transient breakage and subsequent rejoining of DNA strands. Topoisomerase II makes double-strand breaks (1478 aa)
     
  0.786
Solyc09g090660.2.1
Uncharacterized protein (521 aa)
       
  0.751
Solyc11g067010.1.1
Uncharacterized protein (117 aa)
     
  0.737
Solyc09g009300.2.1
Uncharacterized protein (197 aa)
     
  0.737
Solyc12g008370.1.1
Uncharacterized protein (495 aa)
     
  0.732
Solyc11g017220.1.1
Uncharacterized protein (418 aa)
     
  0.732
Solyc00g065630.1.1
Annotation not available (529 aa)
     
  0.732
Solyc06g082720.1.1
Uncharacterized protein (203 aa)
     
  0.723
Your Current Organism:
Solanum lycopersicum
NCBI taxonomy Id: 4081
Other names: Lycopersicon, Lycopersicon (Mill.) Seithe, Lycopersicon esculentum, Lycopersicon esculentum Mill., Lycopersicon esculentum var. esculentum, Lycopersicon lycopersicum, S. lycopersicum, Solanum esculentum, Solanum esculentum Dunal, Solanum lycopersicum, Solanum lycopersicum L., tomato
Server load: low (15%) [HD]