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Solyc01g010740.2.1 protein (Solanum lycopersicum) - STRING interaction network
"Solyc01g010740.2.1" - Pectate lyase in Solanum lycopersicum
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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query proteins and first shell of interactors
white nodes:
second shell of interactors
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proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Solyc01g010740.2.1Pectate lyase (439 aa)    
Predicted Functional Partners:
Solyc02g062150.1.1
Pectinesterase (351 aa)
 
   
  0.934
Solyc00g170510.1.1
Annotation not available (292 aa)
 
   
  0.934
Solyc10g049370.1.1
Pectinesterase (346 aa)
 
   
  0.934
Solyc06g084620.1.1
Pectinesterase (564 aa)
 
   
  0.934
Solyc00g023470.1.1
Annotation not available (348 aa)
 
   
  0.934
Solyc01g066420.2.1
Pectinesterase (552 aa)
 
   
  0.934
Solyc01g079180.2.1
Pectinesterase (387 aa)
 
   
  0.933
Solyc06g009190.2.1
Pectinesterase (564 aa)
 
   
  0.933
Solyc12g099410.1.1
Pectinesterase ; Acts in the modification of cell walls via demethylesterification of cell wall pectin (559 aa)
 
   
  0.933
Solyc10g049380.1.1
Pectinesterase (338 aa)
 
   
  0.933
Your Current Organism:
Solanum lycopersicum
NCBI taxonomy Id: 4081
Other names: Lycopersicon, Lycopersicon (Mill.) Seithe, Lycopersicon esculentum, Lycopersicon esculentum Mill., Lycopersicon esculentum var. esculentum, Lycopersicon lycopersicum, S. lycopersicum, Solanum esculentum, Solanum esculentum Dunal, Solanum lycopersicum, Solanum lycopersicum L., tomato
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