STRINGSTRING
Solyc01g010830.2.1 protein (Solanum lycopersicum) - STRING interaction network
"Solyc01g010830.2.1" - Uncharacterized protein in Solanum lycopersicum
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Solyc01g010830.2.1Uncharacterized protein (258 aa)    
Predicted Functional Partners:
Solyc02g081830.2.1
Uncharacterized protein (256 aa)
   
     
  0.712
Solyc04g056540.2.1
Uncharacterized protein (603 aa)
   
 
    0.632
Solyc03g098140.2.1
Uncharacterized protein (343 aa)
       
  0.558
Solyc10g086000.1.1
Uncharacterized protein (730 aa)
       
      0.533
Solyc07g064810.2.1
Uncharacterized protein (588 aa)
       
      0.533
Solyc03g111610.2.1
Uncharacterized protein (317 aa)
     
 
  0.518
Solyc09g090750.2.1
Uncharacterized protein (250 aa)
         
  0.512
Solyc06g076300.2.1
Uncharacterized protein (204 aa)
           
  0.508
Solyc02g069410.2.1
Uncharacterized protein (368 aa)
           
  0.508
Solyc01g068630.2.1
Uncharacterized protein (252 aa)
           
  0.508
Your Current Organism:
Solanum lycopersicum
NCBI taxonomy Id: 4081
Other names: Lycopersicon, Lycopersicon (Mill.) Seithe, Lycopersicon esculentum, Lycopersicon esculentum Mill., Lycopersicon esculentum var. esculentum, Lycopersicon lycopersicum, S. lycopersicum, Solanum esculentum, Solanum esculentum Dunal, Solanum lycopersicum, Solanum lycopersicum L., tomato
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