STRINGSTRING
Solyc01g010870.2.1 protein (Solanum lycopersicum) - STRING interaction network
"Solyc01g010870.2.1" - Uncharacterized protein in Solanum lycopersicum
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Solyc01g010870.2.1Uncharacterized protein (607 aa)    
Predicted Functional Partners:
Solyc10g082040.1.1
HVA22-like protein (189 aa)
           
  0.489
Solyc01g090360.2.1
Non-specific lipid-transfer protein ; Plant non-specific lipid-transfer proteins transfer phospholipids as well as galactolipids across membranes. May play a role in wax or cutin deposition in the cell walls of expanding epidermal cells and certain secretory tissues (115 aa)
           
  0.489
Solyc01g090350.2.1
Non-specific lipid-transfer protein ; Plant non-specific lipid-transfer proteins transfer phospholipids as well as galactolipids across membranes. May play a role in wax or cutin deposition in the cell walls of expanding epidermal cells and certain secretory tissues (120 aa)
           
  0.489
Solyc12g019750.1.1
Uncharacterized protein (405 aa)
           
  0.481
Solyc10g080720.1.1
Uncharacterized protein (408 aa)
           
  0.481
Solyc09g092310.1.1
Uncharacterized protein (850 aa)
           
  0.481
Solyc09g092290.1.1
Uncharacterized protein (848 aa)
           
  0.481
Solyc09g092280.1.1
Uncharacterized protein (846 aa)
           
  0.481
tm-2
Tm-2 protein (861 aa)
           
  0.481
Solyc07g053750.1.1
Uncharacterized protein (417 aa)
           
  0.481
Your Current Organism:
Solanum lycopersicum
NCBI taxonomy Id: 4081
Other names: Lycopersicon, Lycopersicon (Mill.) Seithe, Lycopersicon esculentum, Lycopersicon esculentum Mill., Lycopersicon esculentum var. esculentum, Lycopersicon lycopersicum, S. lycopersicum, Solanum esculentum, Solanum esculentum Dunal, Solanum lycopersicum, Solanum lycopersicum L., tomato
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