STRINGSTRING
Solyc01g010880.2.1 protein (Solanum lycopersicum) - STRING interaction network
"Solyc01g010880.2.1" - Uncharacterized protein in Solanum lycopersicum
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Solyc01g010880.2.1Uncharacterized protein (304 aa)    
Predicted Functional Partners:
Solyc06g084440.2.1
Uncharacterized protein (411 aa)
     
 
  0.781
Solyc08g082480.2.1
Uncharacterized protein (583 aa)
     
  0.752
Solyc05g050590.2.1
Uncharacterized protein (568 aa)
     
  0.752
Solyc03g083350.2.1
Uncharacterized protein (580 aa)
     
  0.752
Solyc01g095990.2.1
Uncharacterized protein (571 aa)
     
  0.752
Solyc11g011900.1.1
Uncharacterized protein (284 aa)
       
  0.727
Solyc11g005670.1.1
Ubiquitin (534 aa)
       
  0.727
Solyc11g005650.1.1
Uncharacterized protein (113 aa)
       
  0.727
Solyc11g005640.1.1
Uncharacterized protein (222 aa)
       
  0.727
Solyc10g006480.1.1
Ubiquitin (457 aa)
       
  0.727
Your Current Organism:
Solanum lycopersicum
NCBI taxonomy Id: 4081
Other names: Lycopersicon, Lycopersicon (Mill.) Seithe, Lycopersicon esculentum, Lycopersicon esculentum Mill., Lycopersicon esculentum var. esculentum, Lycopersicon lycopersicum, S. lycopersicum, Solanum esculentum, Solanum esculentum Dunal, Solanum lycopersicum, Solanum lycopersicum L., tomato
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