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  • 11.0 (preview - - version 10.5 still available here)
STRINGSTRING
Solyc01g012630.1.1 protein (Solanum lycopersicum) - STRING interaction network
"Solyc01g012630.1.1" - annotation not available in Solanum lycopersicum
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Solyc01g012630.1.1annotation not available (131 aa)    
Predicted Functional Partners:
Solyc11g021130.1.1
annotation not available (285 aa)
   
 
  0.716
Solyc04g049260.1.1
annotation not available (166 aa)
   
 
  0.716
AGO7
AGO7; Argonaute family protein; Belongs to the argonaute family (1000 aa)
     
 
  0.675
101250389
RNA-dependent RNA polymerase; Probably involved in the RNA silencing pathway and required for the generation of small interfering RNAs (siRNAs) (1119 aa)
     
 
  0.672
AGO6
AGO6; Argonaute family protein; Belongs to the argonaute family (903 aa)
     
 
  0.658
AGO5
AGO5; Argonaute family protein; Belongs to the argonaute family (1011 aa)
     
 
  0.657
RdRP
RNA-dependent RNA polymerase; Probably involved in the RNA silencing pathway and required for the generation of small interfering RNAs (siRNAs) (1114 aa)
     
 
  0.645
101264590
annotation not available (936 aa)
       
 
  0.617
Solyc00g026870.1.1
annotation not available (465 aa)
   
 
  0.611
Solyc01g056620.2.1
double-stranded-RNA-binding protein 4 (288 aa)
       
 
  0.603
Your Current Organism:
Solanum lycopersicum
NCBI taxonomy Id: 4081
Other names: Lycopersicon esculentum, Lycopersicon esculentum Mill., Lycopersicon esculentum var. esculentum, S. lycopersicum, Solanum esculentum, Solanum esculentum Dunal, Solanum lycopersicum, Solanum lycopersicum L., tomato
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