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STRINGSTRING
Solyc01g012690.1.1 protein (Solanum lycopersicum) - STRING interaction network
"Solyc01g012690.1.1" - annotation not available in Solanum lycopersicum
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Solyc01g012690.1.1annotation not available (113 aa)    
Predicted Functional Partners:
Solyc10g054290.1.1
annotation not available (158 aa)
   
 
      0.479
Solyc01g108850.2.1
annotation not available (455 aa)
   
 
      0.471
Solyc07g062940.2.1
annotation not available (716 aa)
     
 
  0.459
Solyc09g014590.2.1
annotation not available (312 aa)
   
          0.447
Solyc06g033960.1.1
annotation not available (148 aa)
   
          0.447
Solyc04g076980.2.1
annotation not available (239 aa)
   
          0.447
Solyc12g019870.1.1
annotation not available (352 aa)
   
          0.446
Solyc09g064670.1.1
annotation not available (503 aa)
   
          0.446
Solyc00g110870.2.1
annotation not available (438 aa)
   
 
      0.445
Solyc10g047490.1.1
annotation not available (371 aa)
   
          0.445
Your Current Organism:
Solanum lycopersicum
NCBI taxonomy Id: 4081
Other names: Lycopersicon esculentum, Lycopersicon esculentum Mill., Lycopersicon esculentum var. esculentum, S. lycopersicum, Solanum esculentum, Solanum esculentum Dunal, Solanum lycopersicum, Solanum lycopersicum L., tomato
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