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  • 11.0 (preview - - version 10.5 still available here)
STRINGSTRING
Solyc01g014130.1.1 protein (Solanum lycopersicum) - STRING interaction network
"Solyc01g014130.1.1" - annotation not available in Solanum lycopersicum
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Solyc01g014130.1.1annotation not available (113 aa)    
Predicted Functional Partners:
Solyc07g020730.1.1
annotation not available (408 aa)
   
     
  0.479
Solyc10g054290.1.1
annotation not available (158 aa)
   
 
      0.479
Solyc07g054120.1.1
annotation not available (611 aa)
   
     
  0.474
Solyc01g108850.2.1
annotation not available (455 aa)
   
 
      0.469
Solyc12g005610.1.1
annotation not available (328 aa)
   
     
  0.461
Solyc07g062940.2.1
annotation not available (716 aa)
     
 
  0.459
Solyc02g068540.1.1
annotation not available (553 aa)
   
     
  0.453
Solyc01g014940.1.1
annotation not available (319 aa)
   
          0.448
Solyc01g014150.1.1
annotation not available (219 aa)
   
          0.448
Solyc12g019870.1.1
annotation not available (352 aa)
   
          0.447
Your Current Organism:
Solanum lycopersicum
NCBI taxonomy Id: 4081
Other names: Lycopersicon esculentum, Lycopersicon esculentum Mill., Lycopersicon esculentum var. esculentum, S. lycopersicum, Solanum esculentum, Solanum esculentum Dunal, Solanum lycopersicum, Solanum lycopersicum L., tomato
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