• Version:
  • 11.0 (preview - - version 10.5 still available here)
STRINGSTRING
Solyc01g017030.1.1 protein (Solanum lycopersicum) - STRING interaction network
"Solyc01g017030.1.1" - annotation not available in Solanum lycopersicum
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Solyc01g017030.1.1annotation not available (153 aa)    
Predicted Functional Partners:
Solyc11g062010.1.1
Uncharacterized protein; P-loop containing nucleoside triphosphate hydrolases superfamily protein (2667 aa)
     
 
  0.724
101264507
annotation not available (526 aa)
     
 
  0.709
101248354
annotation not available (544 aa)
     
 
  0.709
101245796
Transcription regulatory protein SNF2, putative (2236 aa)
     
 
  0.696
Solyc01g079700.2.1
annotation not available (151 aa)
     
 
  0.696
SlCHR1
annotation not available (995 aa)
     
 
  0.696
Solyc11g013430.1.1
annotation not available (150 aa)
     
 
  0.617
Solyc11g013410.1.1
annotation not available (94 aa)
     
 
  0.617
Solyc11g013400.1.1
annotation not available (209 aa)
     
 
  0.617
101264940
Uncharacterized protein; SWITCH/sucrose nonfermenting 3C (791 aa)
     
 
  0.598
Your Current Organism:
Solanum lycopersicum
NCBI taxonomy Id: 4081
Other names: Lycopersicon esculentum, Lycopersicon esculentum Mill., Lycopersicon esculentum var. esculentum, S. lycopersicum, Solanum esculentum, Solanum esculentum Dunal, Solanum lycopersicum, Solanum lycopersicum L., tomato
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