STRINGSTRING
Solyc01g017330.1.1 protein (Solanum lycopersicum) - STRING interaction network
"Solyc01g017330.1.1" - Uncharacterized protein in Solanum lycopersicum
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Solyc01g017330.1.1Uncharacterized protein (138 aa)    
Predicted Functional Partners:
Solyc09g015300.1.1
Uncharacterized protein (118 aa)
 
          0.577
Solyc02g020960.1.1
Uncharacterized protein (283 aa)
 
          0.570
Solyc09g015340.1.1
Uncharacterized protein (206 aa)
 
          0.569
Solyc12g032980.1.1
Uncharacterized protein (131 aa)
   
          0.526
Solyc09g059640.1.1
Uncharacterized protein (112 aa)
   
          0.526
Solyc12g062600.1.1
Uncharacterized protein (99 aa)
   
          0.525
Solyc07g021240.1.1
Uncharacterized protein (169 aa)
   
          0.525
Solyc12g035740.1.1
Uncharacterized protein (148 aa)
   
          0.521
Solyc12g035580.1.1
Uncharacterized protein (52 aa)
   
          0.521
Solyc02g036320.1.1
Uncharacterized protein (63 aa)
   
          0.521
Your Current Organism:
Solanum lycopersicum
NCBI taxonomy Id: 4081
Other names: Lycopersicon, Lycopersicon (Mill.) Seithe, Lycopersicon esculentum, Lycopersicon esculentum Mill., Lycopersicon esculentum var. esculentum, Lycopersicon lycopersicum, S. lycopersicum, Solanum esculentum, Solanum esculentum Dunal, Solanum lycopersicum, Solanum lycopersicum L., tomato
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