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STRINGSTRING
Solyc01g017370.1.1 protein (Solanum lycopersicum) - STRING interaction network
"Solyc01g017370.1.1" - annotation not available in Solanum lycopersicum
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Solyc01g017370.1.1annotation not available (165 aa)    
Predicted Functional Partners:
Solyc07g021380.1.1
annotation not available (121 aa)
   
   
  0.950
Solyc09g065790.1.1
annotation not available (176 aa)
     
   
  0.930
Solyc11g021130.1.1
annotation not available (285 aa)
 
 
  0.923
3950406
Photosystem I reaction center subunit VIII; May help in the organization of the PsaL subunit (72 aa)
     
   
  0.915
matK
Maturase K; Usually encoded in the trnK tRNA gene intron. Probably assists in splicing its own and other chloroplast group II introns (131 aa)
     
   
  0.901
Solyc05g041360.1.1
Maturase K; Usually encoded in the trnK tRNA gene intron. Probably assists in splicing its own and other chloroplast group II introns (143 aa)
     
   
  0.901
Solyc09g015280.1.1
Uncharacterized protein; Tetratricopeptide repeat (TPR)-like superfamily protein (149 aa)
     
 
  0.897
ycf3
Photosystem I assembly protein Ycf3; Essential for the assembly of the photosystem I (PSI) complex. May act as a chaperone-like factor to guide the assembly of the PSI subunits (84 aa)
     
 
  0.897
Solyc04g049260.1.1
annotation not available (166 aa)
   
 
  0.894
3950421
Chloroplast envelope membrane protein; May be involved in proton extrusion. Indirectly promotes efficient inorganic carbon uptake into chloroplasts (229 aa)
   
   
  0.850
Your Current Organism:
Solanum lycopersicum
NCBI taxonomy Id: 4081
Other names: Lycopersicon esculentum, Lycopersicon esculentum Mill., Lycopersicon esculentum var. esculentum, S. lycopersicum, Solanum esculentum, Solanum esculentum Dunal, Solanum lycopersicum, Solanum lycopersicum L., tomato
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