Solyc01g017370.1.1 protein (Solanum lycopersicum)

Nodes:

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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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second shell of interactors

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proteins of unknown 3D structure

filled nodes:
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Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.

Known Interactions

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experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

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textmining

co-expression

protein homology

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[Homology]

Score

Solyc01g017370.1.1

Uncharacterized protein (165 aa)

Predicted Functional Partners:

Solyc02g044050.1.1

0.996

Solyc12g035930.1.1

0.995

Solyc12g035790.1.1

0.995

Solyc12g017750.1.1

0.994

Solyc12g037940.1.1

0.994

Solyc01g017360.1.1

0.994

Solyc01g017300.1.1

0.993

Solyc10g017920.1.1

0.993

Solyc12g035950.1.1

0.991

Solyc12g035940.1.1

0.991

Your Current Organism:

Solanum lycopersicum

NCBI taxonomy Id: 4081
Other names: Lycopersicon, Lycopersicon (Mill.) Seithe, Lycopersicon esculentum, Lycopersicon esculentum Mill., Lycopersicon esculentum var. esculentum, Lycopersicon lycopersicum, S. lycopersicum, Solanum esculentum, Solanum esculentum Dunal, Solanum lycopersicum, Solanum lycopersicum L., tomato

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structured XML interaction data, according to the 'PSI-MI' data standard

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... protein sequences:

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MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

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a tab-delimited file describing the names, domains and annotated functions of the network proteins

Browse interactions in tabular form:

node1	node2	node1 annotation	node2 annotation	score
Solyc01g017300.1.1	Solyc01g017360.1.1	Uncharacterized protein	Uncharacterized protein	0.510
Solyc01g017300.1.1	Solyc01g017370.1.1	Uncharacterized protein	Uncharacterized protein	0.993
Solyc01g017300.1.1	Solyc12g017750.1.1	Uncharacterized protein	Uncharacterized protein	0.517
Solyc01g017300.1.1	Solyc12g035790.1.1	Uncharacterized protein	Uncharacterized protein	0.503
Solyc01g017300.1.1	Solyc12g035930.1.1	Uncharacterized protein	Uncharacterized protein	0.492
Solyc01g017300.1.1	Solyc12g037940.1.1	Uncharacterized protein	Uncharacterized protein	0.509
Solyc01g017360.1.1	Solyc01g017300.1.1	Uncharacterized protein	Uncharacterized protein	0.510
Solyc01g017360.1.1	Solyc01g017370.1.1	Uncharacterized protein	Uncharacterized protein	0.994
Solyc01g017360.1.1	Solyc12g017750.1.1	Uncharacterized protein	Uncharacterized protein	0.523
Solyc01g017360.1.1	Solyc12g035790.1.1	Uncharacterized protein	Uncharacterized protein	0.522
Solyc01g017360.1.1	Solyc12g035930.1.1	Uncharacterized protein	Uncharacterized protein	0.522
Solyc01g017370.1.1	Solyc01g017300.1.1	Uncharacterized protein	Uncharacterized protein	0.993
Solyc01g017370.1.1	Solyc01g017360.1.1	Uncharacterized protein	Uncharacterized protein	0.994
Solyc01g017370.1.1	Solyc02g044050.1.1	Uncharacterized protein	Uncharacterized protein	0.996
Solyc01g017370.1.1	Solyc10g017920.1.1	Uncharacterized protein	Uncharacterized protein	0.993
Solyc01g017370.1.1	Solyc12g017750.1.1	Uncharacterized protein	Uncharacterized protein	0.994
Solyc01g017370.1.1	Solyc12g035790.1.1	Uncharacterized protein	Uncharacterized protein	0.995
Solyc01g017370.1.1	Solyc12g035930.1.1	Uncharacterized protein	Uncharacterized protein	0.995
Solyc01g017370.1.1	Solyc12g035940.1.1	Uncharacterized protein	Uncharacterized protein	0.991
Solyc01g017370.1.1	Solyc12g035950.1.1	Uncharacterized protein	Uncharacterized protein	0.991

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