STRINGSTRING
Solyc01g021640.2.1 protein (Solanum lycopersicum) - STRING interaction network
"Solyc01g021640.2.1" - Uncharacterized protein in Solanum lycopersicum
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Solyc01g021640.2.1Uncharacterized protein (496 aa)    
Predicted Functional Partners:
DDB1
DNA damage-binding protein 1 ; Component of light signal transduction machinery. Involved in fruit pigmentation and fruit nutritional quality. Acts as a negative regulator of fruit pigmentation. Probably acts by participating in the CDD complex, a complex probably required to regulate the activity of ubiquitin conjugating enzymes. Repression of photomorphogenesis is probably mediated by ubiquitination and subsequent degradation of photomorphogenesis-promoting factors such as HY5 (1095 aa)
       
      0.894
Solyc10g005660.2.1
Uncharacterized protein (313 aa)
       
      0.581
Solyc02g093920.2.1
Uncharacterized protein (428 aa)
       
      0.581
Solyc11g062430.1.1
Uncharacterized protein (439 aa)
       
 
  0.482
Solyc10g081150.1.1
Uncharacterized protein (439 aa)
       
 
  0.482
Solyc01g008840.2.1
Uncharacterized protein (439 aa)
       
 
  0.482
Solyc04g076020.2.1
Uncharacterized protein (761 aa)
           
  0.457
Your Current Organism:
Solanum lycopersicum
NCBI taxonomy Id: 4081
Other names: Lycopersicon, Lycopersicon (Mill.) Seithe, Lycopersicon esculentum, Lycopersicon esculentum Mill., Lycopersicon esculentum var. esculentum, Lycopersicon lycopersicum, S. lycopersicum, Solanum esculentum, Solanum esculentum Dunal, Solanum lycopersicum, Solanum lycopersicum L., tomato
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