STRINGSTRING
Solyc01g021740.1.1 protein (Solanum lycopersicum) - STRING interaction network
"Solyc01g021740.1.1" - Uncharacterized protein in Solanum lycopersicum
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Solyc01g021740.1.1Uncharacterized protein (117 aa)    
Predicted Functional Partners:
Solyc11g066410.1.1
Uncharacterized protein (192 aa)
     
    0.613
Solyc05g032880.2.1
Uncharacterized protein (224 aa)
     
    0.613
Solyc12g013990.1.1
Uncharacterized protein (398 aa)
     
    0.605
Solyc01g087730.2.1
Ribosomal protein (338 aa)
     
    0.605
Solyc11g021130.1.1
Ribosomal protein S7 (285 aa)
     
 
  0.562
Solyc04g049260.1.1
Uncharacterized protein (166 aa)
     
 
  0.562
NIA
Nitrate reductase [NADH] ; Nitrate reductase is a key enzyme involved in the first step of nitrate assimilation in plants, fungi and bacteria (912 aa)
     
   
  0.554
Solyc07g008270.2.1
Ribosomal protein (87 aa)
         
  0.492
Your Current Organism:
Solanum lycopersicum
NCBI taxonomy Id: 4081
Other names: Lycopersicon, Lycopersicon (Mill.) Seithe, Lycopersicon esculentum, Lycopersicon esculentum Mill., Lycopersicon esculentum var. esculentum, Lycopersicon lycopersicum, S. lycopersicum, Solanum esculentum, Solanum esculentum Dunal, Solanum lycopersicum, Solanum lycopersicum L., tomato
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