STRINGSTRING
Solyc01g028900.2.1 protein (Solanum lycopersicum) - STRING interaction network
"Solyc01g028900.2.1" - Uncharacterized protein in Solanum lycopersicum
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Solyc01g028900.2.1Uncharacterized protein (358 aa)    
Predicted Functional Partners:
Solyc05g056480.2.1
Uncharacterized protein (467 aa)
  0.999
LOC778303
Branched chain alpha-keto acid dehydrogenase E1-alpha subunit (456 aa)
  0.999
Solyc04g063350.2.1
Uncharacterized protein (472 aa)
  0.999
Solyc06g059850.1.1
Uncharacterized protein (380 aa)
  0.999
Solyc01g066520.2.1
Uncharacterized protein (505 aa)
 
  0.998
Solyc12g055890.1.1
Uncharacterized protein (297 aa)
 
  0.997
Solyc12g055880.1.1
Uncharacterized protein (135 aa)
 
  0.996
Solyc04g025710.1.1
Uncharacterized protein (108 aa)
 
  0.996
Solyc10g052820.1.1
Uncharacterized protein (78 aa)
   
  0.994
Solyc06g043360.1.1
Uncharacterized protein (88 aa)
   
  0.994
Your Current Organism:
Solanum lycopersicum
NCBI taxonomy Id: 4081
Other names: Lycopersicon, Lycopersicon (Mill.) Seithe, Lycopersicon esculentum, Lycopersicon esculentum Mill., Lycopersicon esculentum var. esculentum, Lycopersicon lycopersicum, S. lycopersicum, Solanum esculentum, Solanum esculentum Dunal, Solanum lycopersicum, Solanum lycopersicum L., tomato
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