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STRINGSTRING
Solyc01g034050.1.1 protein (Solanum lycopersicum) - STRING interaction network
"Solyc01g034050.1.1" - annotation not available in Solanum lycopersicum
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Solyc01g034050.1.1annotation not available (148 aa)    
Predicted Functional Partners:
101244286
SET domain protein 35 (532 aa)
           
  0.691
101250052
ASH1-related protein 2 (379 aa)
           
  0.670
101249101
Uncharacterized protein; Histone-lysine N-methyltransferase ATXR2 (485 aa)
           
  0.585
101261863
Uncharacterized protein; DROUGHT SENSITIVE 1 (474 aa)
       
 
  0.582
Solyc12g013960.1.1
annotation not available (614 aa)
           
  0.555
Solyc07g055140.2.1
annotation not available (352 aa)
           
  0.555
101247686
annotation not available (695 aa)
           
  0.555
Solyc07g006060.2.1
Uncharacterized protein; SET domain group 4 (246 aa)
     
   
  0.554
Solyc07g006050.1.1
annotation not available (564 aa)
     
   
  0.554
Solyc03g095240.2.1
annotation not available (674 aa)
           
  0.552
Your Current Organism:
Solanum lycopersicum
NCBI taxonomy Id: 4081
Other names: Lycopersicon esculentum, Lycopersicon esculentum Mill., Lycopersicon esculentum var. esculentum, S. lycopersicum, Solanum esculentum, Solanum esculentum Dunal, Solanum lycopersicum, Solanum lycopersicum L., tomato
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