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  • 11.0 (preview - - version 10.5 still available here)
STRINGSTRING
Solyc01g050040.2.1 protein (Solanum lycopersicum) - STRING interaction network
"Solyc01g050040.2.1" - annotation not available in Solanum lycopersicum
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Solyc01g050040.2.1annotation not available (292 aa)    
Predicted Functional Partners:
101249164
Molecular chaperone Hsp40/DnaJ family protein (498 aa)
           
  0.854
101251928
Uncharacterized protein; Respiratory burst oxidase homolog B (865 aa)
           
  0.822
Solyc08g080040.2.1
Uncharacterized protein; Leucoanthocyanidin dioxygenase; Belongs to the iron/ascorbate-dependent oxidoreductase family (418 aa)
           
  0.767
101256817
annotation not available (199 aa)
       
 
  0.753
101259447
Uncharacterized protein; Cytochrome P450, family 86, subfamily A, polypeptide 1 (521 aa)
           
  0.751
101254146
UBC22; Ubiquitin-conjugating enzyme 22; Belongs to the ubiquitin-conjugating enzyme family (263 aa)
       
 
  0.694
101263947
Uncharacterized protein; Homolog of separase (2128 aa)
     
   
  0.689
Solyc11g006470.1.1
annotation not available (362 aa)
           
  0.677
101253370
annotation not available (344 aa)
           
  0.677
101265030
Uncharacterized protein; Anthranilate synthase 2 (587 aa)
           
  0.656
Your Current Organism:
Solanum lycopersicum
NCBI taxonomy Id: 4081
Other names: Lycopersicon esculentum, Lycopersicon esculentum Mill., Lycopersicon esculentum var. esculentum, S. lycopersicum, Solanum esculentum, Solanum esculentum Dunal, Solanum lycopersicum, Solanum lycopersicum L., tomato
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