STRINGSTRING
Solyc01g056690.2.1 protein (Solanum lycopersicum) - STRING interaction network
"Solyc01g056690.2.1" - Uncharacterized protein in Solanum lycopersicum
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Solyc01g056690.2.1Uncharacterized protein (653 aa)    
Predicted Functional Partners:
Solyc04g006930.2.1
Uncharacterized protein (800 aa)
   
0.905
Solyc10g037910.1.1
Uncharacterized protein (235 aa)
   
  0.895
Solyc07g055200.2.1
Uncharacterized protein (437 aa)
   
  0.895
Solyc06g082640.2.1
Uncharacterized protein (225 aa)
   
  0.895
Solyc04g025600.1.1
Uncharacterized protein (107 aa)
   
  0.895
Solyc03g006070.2.1
Uncharacterized protein (382 aa)
   
  0.895
Solyc01g101000.2.1
Uncharacterized protein (409 aa)
   
  0.895
MAPK11
Mitogen-activated protein kinase 11 (600 aa)
       
0.859
MAPK10
Mitogen-activated protein kinase 10 (593 aa)
       
0.859
MAPK12
Mitogen-activated protein kinase 12 (621 aa)
       
0.859
Your Current Organism:
Solanum lycopersicum
NCBI taxonomy Id: 4081
Other names: Lycopersicon, Lycopersicon (Mill.) Seithe, Lycopersicon esculentum, Lycopersicon esculentum Mill., Lycopersicon esculentum var. esculentum, Lycopersicon lycopersicum, S. lycopersicum, Solanum esculentum, Solanum esculentum Dunal, Solanum lycopersicum, Solanum lycopersicum L., tomato
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