STRINGSTRING
Solyc01g056780.2.1 protein (Solanum lycopersicum) - STRING interaction network
"Solyc01g056780.2.1" - Uncharacterized protein in Solanum lycopersicum
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Solyc01g056780.2.1Uncharacterized protein (156 aa)    
Predicted Functional Partners:
Solyc06g065390.2.1
Uncharacterized protein (212 aa)
     
      0.951
Solyc06g082760.2.1
Uncharacterized protein (203 aa)
     
      0.914
Solyc06g082750.2.1
Uncharacterized protein (203 aa)
     
      0.914
Solyc11g068820.1.1
Uncharacterized protein (206 aa)
     
      0.910
Solyc10g081100.1.1
Uncharacterized protein (149 aa)
     
      0.821
Solyc06g062760.2.1
Uncharacterized protein (146 aa)
         
    0.800
Solyc02g078200.2.1
Uncharacterized protein (264 aa)
     
      0.770
Solyc10g086330.1.1
Uncharacterized protein (154 aa)
       
      0.721
Solyc10g084610.1.1
Uncharacterized protein (154 aa)
       
      0.721
Solyc09g005720.2.1
Uncharacterized protein (153 aa)
       
      0.721
Your Current Organism:
Solanum lycopersicum
NCBI taxonomy Id: 4081
Other names: Lycopersicon, Lycopersicon (Mill.) Seithe, Lycopersicon esculentum, Lycopersicon esculentum Mill., Lycopersicon esculentum var. esculentum, Lycopersicon lycopersicum, S. lycopersicum, Solanum esculentum, Solanum esculentum Dunal, Solanum lycopersicum, Solanum lycopersicum L., tomato
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