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STRINGSTRING
Solyc01g057240.1.1 protein (Solanum lycopersicum) - STRING interaction network
"Solyc01g057240.1.1" - annotation not available in Solanum lycopersicum
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Solyc01g057240.1.1annotation not available (67 aa)    
Predicted Functional Partners:
Solyc11g021130.1.1
annotation not available (285 aa)
   
 
  0.989
Solyc04g049260.1.1
annotation not available (166 aa)
   
 
  0.989
Solyc08g006840.2.1
annotation not available (327 aa)
     
 
  0.989
101256335
Ribosomal protein S5 domain 2-like superfamily protein; Belongs to the universal ribosomal protein uS9 family (385 aa)
   
 
  0.987
Solyc04g079790.2.1
Ribosomal protein S9; Belongs to the universal ribosomal protein uS9 family (237 aa)
   
 
  0.987
Solyc00g026870.1.1
annotation not available (465 aa)
     
 
  0.986
101249096
Mitochondrial 28S ribosomal protein S29-related (452 aa)
     
 
  0.986
101248086
Ribosomal protein L6 family; Belongs to the universal ribosomal protein uL6 family (257 aa)
   
 
  0.985
101259499
Ribosomal protein L6 family protein; Belongs to the universal ribosomal protein uL6 family (102 aa)
   
 
  0.985
101250331
Ribosomal L5P family protein (265 aa)
   
 
  0.984
Your Current Organism:
Solanum lycopersicum
NCBI taxonomy Id: 4081
Other names: Lycopersicon esculentum, Lycopersicon esculentum Mill., Lycopersicon esculentum var. esculentum, S. lycopersicum, Solanum esculentum, Solanum esculentum Dunal, Solanum lycopersicum, Solanum lycopersicum L., tomato
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