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SAR2 protein (Solanum lycopersicum) - STRING interaction network
"SAR2" - GTP-binding protein SAR2 in Solanum lycopersicum
Nodes:
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SAR2GTP-binding protein SAR2 ; Involved in transport from the endoplasmic reticulum to the Golgi apparatus (193 aa)    
Predicted Functional Partners:
Solyc01g088020.2.1
Uncharacterized protein (1124 aa)
     
  0.994
Solyc11g007780.1.1
Uncharacterized protein (384 aa)
       
  0.951
Solyc07g047970.2.1
Uncharacterized protein (391 aa)
       
  0.951
Solyc03g120900.1.1
Uncharacterized protein (301 aa)
     
 
  0.949
Solyc02g087300.1.1
Uncharacterized protein (302 aa)
     
 
  0.949
Rab1A
Small GTP-binding protein (203 aa)
     
 
  0.941
Solyc11g032010.1.1
Uncharacterized protein (202 aa)
     
  0.905
Solyc11g056380.1.1
Uncharacterized protein (153 aa)
     
  0.904
Solyc09g092680.2.1
Uncharacterized protein (766 aa)
     
  0.904
Solyc09g055810.1.1
Uncharacterized protein (79 aa)
     
  0.904
Your Current Organism:
Solanum lycopersicum
NCBI taxonomy Id: 4081
Other names: Lycopersicon, Lycopersicon (Mill.) Seithe, Lycopersicon esculentum, Lycopersicon esculentum Mill., Lycopersicon esculentum var. esculentum, Lycopersicon lycopersicum, S. lycopersicum, Solanum esculentum, Solanum esculentum Dunal, Solanum lycopersicum, Solanum lycopersicum L., tomato
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