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101266558 protein (Solanum lycopersicum) - STRING interaction network
"101266558" - Uncharacterized protein in Solanum lycopersicum
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
101266558Uncharacterized protein; Pumilio 24 (620 aa)    
Predicted Functional Partners:
Solyc01g090470.2.1
rRNA processing protein-related (389 aa)
     
 
  0.985
101265585
Uncharacterized protein; P-loop containing nucleoside triphosphate hydrolases superfamily protein; Belongs to the DEAD box helicase family (799 aa)
     
      0.985
Solyc10g083600.1.1
Ribosomal RNA processing Brix domain protein (337 aa)
     
      0.984
101266117
DEA(D/H)-box RNA helicase family protein; Belongs to the DEAD box helicase family (744 aa)
     
 
  0.984
101263645
Uncharacterized protein; RNA-binding (RRM/RBD/RNP motifs) family protein (1012 aa)
     
      0.984
101251902
Nucleotide binding;protein binding (452 aa)
     
      0.983
Solyc03g123530.2.1
Uncharacterized protein; CCAAT-binding factor (1049 aa)
     
      0.983
101246325
Transducin family protein / WD-40 repeat family protein (871 aa)
     
      0.983
101268053
Uncharacterized protein; FUNCTIONS IN- molecular_function unknown; INVOLVED IN- biological_process unknown; LOCATED IN- cytosol, nucleus; EXPRESSED IN- 22 plant structures; EXPRESSED DURING- 13 growth stages; CONTAINS InterPro DOMAIN/s- NUC153 (InterPro-IPR012580); Has 3663 /.../t hits to 21323 proteins in 1057 species- Archae - 109; Bacteria - 2369; Metazoa - 13796; Fungi - 4858; Plants - 1657; Viruses - 489; Other Eukaryotes - 13360 (source- NCBI BLink) (768 aa)
     
      0.983
101255555
Uncharacterized protein; P-loop containing nucleoside triphosphate hydrolases superfamily protein (585 aa)
     
      0.983
Your Current Organism:
Solanum lycopersicum
NCBI taxonomy Id: 4081
Other names: Lycopersicon esculentum, Lycopersicon esculentum Mill., Lycopersicon esculentum var. esculentum, S. lycopersicum, Solanum esculentum, Solanum esculentum Dunal, Solanum lycopersicum, Solanum lycopersicum L., tomato
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