STRINGSTRING
Solyc01g066410.1.1 protein (Solanum lycopersicum) - STRING interaction network
"Solyc01g066410.1.1" - Pectinesterase in Solanum lycopersicum
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query proteins and first shell of interactors
white nodes:
second shell of interactors
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proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Solyc01g066410.1.1Pectinesterase (210 aa)    
Predicted Functional Partners:
Solyc01g067410.1.1
Pectinesterase (242 aa)
   
          0.487
Solyc11g051010.1.1
Pectinesterase (137 aa)
   
          0.480
Solyc10g052730.1.1
Pectinesterase (171 aa)
   
          0.467
Solyc01g067420.2.1
Pectinesterase (271 aa)
   
          0.445
Solyc07g065350.1.1
Pectinesterase (357 aa)
   
          0.441
Solyc00g170510.1.1
Annotation not available (292 aa)
   
          0.438
Solyc07g065360.1.1
Pectinesterase (356 aa)
   
          0.437
Solyc02g083830.1.1
Pectinesterase ; Acts in the modification of cell walls via demethylesterification of cell wall pectin (292 aa)
   
          0.437
Solyc05g052110.2.1
Pectinesterase (368 aa)
   
          0.434
Solyc12g008530.1.1
Pectinesterase (378 aa)
   
          0.433
Your Current Organism:
Solanum lycopersicum
NCBI taxonomy Id: 4081
Other names: Lycopersicon, Lycopersicon (Mill.) Seithe, Lycopersicon esculentum, Lycopersicon esculentum Mill., Lycopersicon esculentum var. esculentum, Lycopersicon lycopersicum, S. lycopersicum, Solanum esculentum, Solanum esculentum Dunal, Solanum lycopersicum, Solanum lycopersicum L., tomato
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