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STRINGSTRING
101260171 protein (Solanum lycopersicum) - STRING interaction network
"101260171" - annotation not available in Solanum lycopersicum
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
101260171annotation not available (300 aa)    
Predicted Functional Partners:
UBC
Ubiquitin conjugating enzyme E2 ; Belongs to the ubiquitin-conjugating enzyme family (148 aa)
       
 
  0.425
101260872
annotation not available (148 aa)
       
 
  0.425
Solyc08g081950.2.1
annotation not available (119 aa)
       
 
  0.425
101257090
annotation not available (148 aa)
       
 
  0.425
Solyc06g082600.2.1
Ubiquitin-conjugating enzyme E2-17 kDa; Catalyzes the covalent attachment of ubiquitin to other proteins. Mediates the selective degradation of short-lived and abnormal proteins (148 aa)
       
 
  0.425
UBC3
Ubiquitin-conjugating enzyme E2-17 kDa (148 aa)
       
 
  0.425
101252287
annotation not available (148 aa)
       
 
  0.425
101254567
annotation not available (148 aa)
       
 
  0.425
101250739
annotation not available (148 aa)
       
 
  0.425
Solyc00g036760.1.1
annotation not available (321 aa)
     
      0.414
Your Current Organism:
Solanum lycopersicum
NCBI taxonomy Id: 4081
Other names: Lycopersicon esculentum, Lycopersicon esculentum Mill., Lycopersicon esculentum var. esculentum, S. lycopersicum, Solanum esculentum, Solanum esculentum Dunal, Solanum lycopersicum, Solanum lycopersicum L., tomato
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