STRINGSTRING
Solyc01g067040.1.1 protein (Solanum lycopersicum) - STRING interaction network
"Solyc01g067040.1.1" - Uncharacterized protein in Solanum lycopersicum
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Solyc01g067040.1.1Uncharacterized protein (676 aa)    
Predicted Functional Partners:
Solyc12g096990.1.1
Uncharacterized protein (665 aa)
   
  0.933
Solyc10g077070.1.1
Uncharacterized protein (714 aa)
   
  0.933
Solyc09g090810.1.1
Uncharacterized protein (696 aa)
   
  0.933
Solyc08g077940.1.1
Uncharacterized protein (1037 aa)
   
  0.933
Solyc06g060960.1.1
Uncharacterized protein (1055 aa)
   
  0.933
Solyc03g093760.1.1
Uncharacterized protein (797 aa)
   
  0.933
Solyc03g093700.1.1
Uncharacterized protein (839 aa)
   
  0.933
Solyc02g094520.2.1
Uncharacterized protein (677 aa)
   
  0.933
pcna
Proliferating cell nuclear antigen ; This protein is an auxiliary protein of DNA polymerase delta and is involved in the control of eukaryotic DNA replication by increasing the polymerase’s processibility during elongation of the leading strand (264 aa)
   
 
  0.650
RBR1
Retinoblastoma-related protein 1 (1018 aa)
       
  0.648
Your Current Organism:
Solanum lycopersicum
NCBI taxonomy Id: 4081
Other names: Lycopersicon, Lycopersicon (Mill.) Seithe, Lycopersicon esculentum, Lycopersicon esculentum Mill., Lycopersicon esculentum var. esculentum, Lycopersicon lycopersicum, S. lycopersicum, Solanum esculentum, Solanum esculentum Dunal, Solanum lycopersicum, Solanum lycopersicum L., tomato
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