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STRINGSTRING
Solyc01g067270.2.1 protein (Solanum lycopersicum) - STRING interaction network
"Solyc01g067270.2.1" - annotation not available in Solanum lycopersicum
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Solyc01g067270.2.1annotation not available (229 aa)    
Predicted Functional Partners:
101255836
Uncharacterized protein; Cullin-associated and neddylation dissociated (1217 aa)
     
 
  0.865
101249890
annotation not available (116 aa)
     
 
  0.782
101259644
annotation not available (118 aa)
     
 
  0.782
DDB1
DNA damage-binding protein 1; Component of light signal transduction machinery. Involved in fruit pigmentation and fruit nutritional quality. Acts as a negative regulator of fruit pigmentation. Probably acts by participating in the CDD complex, a complex probably required to regulate the activity of ubiquitin conjugating enzymes. Repression of photomorphogenesis is probably mediated by ubiquitination and subsequent degradation of photomorphogenesis-promoting factors such as HY5 (1095 aa)
     
 
  0.780
101259078
Uncharacterized protein; 26S proteasome, regulatory subunit Rpn7;Proteasome component (PCI) domain (440 aa)
     
 
  0.772
Solyc06g076460.2.1
BTB/POZ domain-containing protein; Belongs to the SKP1 family (82 aa)
     
 
  0.772
101255392
Proteasome component (PCI) domain protein (397 aa)
     
 
  0.766
csn5
CSN5 protein (367 aa)
     
 
  0.761
101256005
annotation not available (367 aa)
     
 
  0.761
Solyc04g082410.2.1
annotation not available (322 aa)
     
 
  0.743
Your Current Organism:
Solanum lycopersicum
NCBI taxonomy Id: 4081
Other names: Lycopersicon esculentum, Lycopersicon esculentum Mill., Lycopersicon esculentum var. esculentum, S. lycopersicum, Solanum esculentum, Solanum esculentum Dunal, Solanum lycopersicum, Solanum lycopersicum L., tomato
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