STRINGSTRING
Solyc01g067500.2.1 protein (Solanum lycopersicum) - STRING interaction network
"Solyc01g067500.2.1" - Uncharacterized protein in Solanum lycopersicum
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Solyc01g067500.2.1Uncharacterized protein (478 aa)    
Predicted Functional Partners:
Solyc06g069180.2.1
Uncharacterized protein (581 aa)
     
  0.966
Solyc05g009600.2.1
Uncharacterized protein (587 aa)
     
  0.966
Solyc04g007100.2.1
Uncharacterized protein (525 aa)
     
  0.966
Solyc03g121390.1.1
Uncharacterized protein (203 aa)
     
  0.966
Solyc02g086340.2.1
Uncharacterized protein (955 aa)
     
  0.966
Solyc02g086320.1.1
Uncharacterized protein (97 aa)
     
  0.966
PP2Ac1
Serine/threonine-protein phosphatase (306 aa)
     
  0.883
Solyc01g073650.2.1
Serine/threonine-protein phosphatase (312 aa)
     
  0.883
Solyc01g034020.2.1
Serine/threonine-protein phosphatase (306 aa)
     
  0.883
PP2Ac2
Serine/threonine-protein phosphatase (306 aa)
     
  0.883
Your Current Organism:
Solanum lycopersicum
NCBI taxonomy Id: 4081
Other names: Lycopersicon, Lycopersicon (Mill.) Seithe, Lycopersicon esculentum, Lycopersicon esculentum Mill., Lycopersicon esculentum var. esculentum, Lycopersicon lycopersicum, S. lycopersicum, Solanum esculentum, Solanum esculentum Dunal, Solanum lycopersicum, Solanum lycopersicum L., tomato
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