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STRINGSTRING
Solyc01g067560.2.1 protein (Solanum lycopersicum) - STRING interaction network
"Solyc01g067560.2.1" - annotation not available in Solanum lycopersicum
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Solyc01g067560.2.1annotation not available (1209 aa)    
Predicted Functional Partners:
RBR1
Retinoblastoma-related protein 1 (1018 aa)
     
 
  0.971
Solyc12g007190.1.1
annotation not available (122 aa)
     
 
  0.912
Solyc12g007180.1.1
annotation not available (498 aa)
     
 
  0.912
101253425
annotation not available (829 aa)
     
 
  0.912
Solyc08g067150.2.1
annotation not available (988 aa)
     
 
  0.912
101249098
annotation not available (570 aa)
     
 
  0.912
101262474
Gamma-tubulin complex component; Gamma-tubulin complex is necessary for microtubule nucleation at the centrosome (707 aa)
     
        0.857
Solyc11g020290.1.1
annotation not available (139 aa)
     
 
  0.851
Solyc07g039330.2.1
annotation not available (377 aa)
     
 
  0.851
Solyc07g039320.2.1
annotation not available (152 aa)
     
 
  0.851
Your Current Organism:
Solanum lycopersicum
NCBI taxonomy Id: 4081
Other names: Lycopersicon esculentum, Lycopersicon esculentum Mill., Lycopersicon esculentum var. esculentum, S. lycopersicum, Solanum esculentum, Solanum esculentum Dunal, Solanum lycopersicum, Solanum lycopersicum L., tomato
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