STRINGSTRING
Solyc01g067590.2.1 protein (Solanum lycopersicum) - STRING interaction network
"Solyc01g067590.2.1" - Uncharacterized protein in Solanum lycopersicum
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Solyc01g067590.2.1Uncharacterized protein (482 aa)    
Predicted Functional Partners:
Solyc08g081150.2.1
Uncharacterized protein (536 aa)
   
  0.999
Solyc03g118070.2.1
Uncharacterized protein (466 aa)
     
0.988
Solyc01g099280.2.1
Uncharacterized protein (483 aa)
     
0.987
Solyc12g098910.1.1
Uncharacterized protein (467 aa)
     
  0.980
Solyc12g077370.1.1
Uncharacterized protein (229 aa)
     
  0.980
CIPK6
CBL-interacting protein kinase 6 (432 aa)
     
  0.980
cipk
Calcineurin B-like interacting protein kinase; Putative SOS2-like protein kinase (446 aa)
     
  0.980
Solyc11g062410.1.1
Non-specific serine/threonine protein kinase (437 aa)
     
  0.980
Solyc11g039820.1.1
Uncharacterized protein (130 aa)
     
  0.980
Solyc11g039810.1.1
Uncharacterized protein (140 aa)
     
  0.980
Your Current Organism:
Solanum lycopersicum
NCBI taxonomy Id: 4081
Other names: Lycopersicon, Lycopersicon (Mill.) Seithe, Lycopersicon esculentum, Lycopersicon esculentum Mill., Lycopersicon esculentum var. esculentum, Lycopersicon lycopersicum, S. lycopersicum, Solanum esculentum, Solanum esculentum Dunal, Solanum lycopersicum, Solanum lycopersicum L., tomato
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