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STRINGSTRING
Solyc01g067680.2.1 protein (Solanum lycopersicum) - STRING interaction network
"Solyc01g067680.2.1" - annotation not available in Solanum lycopersicum
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Solyc01g067680.2.1annotation not available (249 aa)    
Predicted Functional Partners:
101260474
alpha/beta-Hydrolases superfamily protein (322 aa)
           
  0.785
101252188
annotation not available (196 aa)
           
  0.776
Solyc08g078260.1.1
annotation not available (300 aa)
           
  0.636
101264960
annotation not available (357 aa)
           
  0.636
101260951
annotation not available (822 aa)
       
 
  0.576
Solyc02g014450.1.1
annotation not available (726 aa)
       
 
  0.576
101267189
Uncharacterized protein; FUNCTIONS IN- molecular_function unknown; INVOLVED IN- biological_process unknown; LOCATED IN- cellular_component unknown; EXPRESSED IN- 25 plant structures; EXPRESSED DURING- 15 growth stages; CONTAINS InterPro DOMAIN/s- Protein of unknown function /.../83, C-terminal (InterPro-IPR012880), Foie gras liver health family 1 (InterPro-IPR021773); Has 30201 Blast hits to 17322 proteins in 780 species- Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source- NCBI BLink) (1176 aa)
           
  0.440
101258962
Uncharacterized protein; PLANT HOMOLOGOUS TO PARAFIBROMIN (393 aa)
       
      0.400
Your Current Organism:
Solanum lycopersicum
NCBI taxonomy Id: 4081
Other names: Lycopersicon esculentum, Lycopersicon esculentum Mill., Lycopersicon esculentum var. esculentum, S. lycopersicum, Solanum esculentum, Solanum esculentum Dunal, Solanum lycopersicum, Solanum lycopersicum L., tomato
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