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STRINGSTRING
101257506 protein (Solanum lycopersicum) - STRING interaction network
"101257506" - annotation not available in Solanum lycopersicum
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
101257506annotation not available (533 aa)    
Predicted Functional Partners:
101247472
annotation not available (1846 aa)
     
 
  0.961
101257890
Ubiquitin-protein ligase 4 (1553 aa)
     
 
  0.961
Solyc01g111530.2.1
annotation not available (1860 aa)
     
 
  0.961
Solyc10g083060.1.1
annotation not available (84 aa)
     
 
  0.887
101245798
annotation not available (468 aa)
     
 
  0.887
Solyc09g059310.2.1
annotation not available (474 aa)
     
 
  0.887
101265248
Uncharacterized protein; Nuclear transport factor 2 (NTF2) family protein with RNA binding (RRM-RBD-RNP motifs) domain (455 aa)
     
 
  0.887
101250028
annotation not available (476 aa)
     
 
  0.887
101255597
annotation not available (478 aa)
     
 
  0.887
101262310
annotation not available (411 aa)
     
 
  0.887
Your Current Organism:
Solanum lycopersicum
NCBI taxonomy Id: 4081
Other names: Lycopersicon esculentum, Lycopersicon esculentum Mill., Lycopersicon esculentum var. esculentum, S. lycopersicum, Solanum esculentum, Solanum esculentum Dunal, Solanum lycopersicum, Solanum lycopersicum L., tomato
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