• Version:
  • 11.0 (preview - - version 10.5 still available here)
STRINGSTRING
Solyc01g068260.2.1 protein (Solanum lycopersicum) - STRING interaction network
"Solyc01g068260.2.1" - Uncharacterized protein in Solanum lycopersicum
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Solyc01g068260.2.1Uncharacterized protein; Transcription coactivators (983 aa)    
Predicted Functional Partners:
101249010
Uncharacterized protein; Cell division cycle 45 (595 aa)
     
 
  0.969
101256302
DNA helicase; Minichromosome maintenance (MCM2/3/5) family protein; Belongs to the MCM family (737 aa)
     
 
  0.960
101256634
Uncharacterized protein; Ataxia telangiectasia-mutated and RAD3-related (2728 aa)
     
 
  0.942
101264867
DNA helicase; Minichromosome maintenance (MCM2/3/5) family protein; Belongs to the MCM family (831 aa)
     
 
  0.938
101268250
DNA helicase; Minichromosome maintenance (MCM2/3/5) family protein; Belongs to the MCM family (787 aa)
     
 
  0.936
Solyc03g114040.2.1
Uncharacterized protein; Putative recombination initiation defect 1 (1341 aa)
           
  0.926
101265731
annotation not available (260 aa)
     
 
  0.912
101265438
DNA replication complex GINS protein PSF2; PSF2; Belongs to the GINS2/PSF2 family (210 aa)
     
 
  0.910
101260506
Uncharacterized protein; Nuclear factor Y, subunit B11 (175 aa)
     
 
  0.908
101259988
Cell cycle checkpoint control protein family (440 aa)
     
 
  0.902
Your Current Organism:
Solanum lycopersicum
NCBI taxonomy Id: 4081
Other names: Lycopersicon esculentum, Lycopersicon esculentum Mill., Lycopersicon esculentum var. esculentum, S. lycopersicum, Solanum esculentum, Solanum esculentum Dunal, Solanum lycopersicum, Solanum lycopersicum L., tomato
Server load: low (7%) [HD]