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PIN5 protein (Solanum lycopersicum) - STRING interaction network
"PIN5" - Auxin efflux facilitator SlPIN5 in Solanum lycopersicum
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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query proteins and first shell of interactors
white nodes:
second shell of interactors
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proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PIN5Auxin efflux facilitator SlPIN5 ; May act as a component of the auxin efflux carrier (358 aa)    
Predicted Functional Partners:
STP16
Hexose carrier protein HEX6 (514 aa)
           
  0.699
PMT4
Polyol transporter 5-like (541 aa)
           
  0.697
FZY5
Flavin monooxygenase-like protein (416 aa)
           
  0.695
FZY4
Flavin monooxygenase-like protein (411 aa)
           
  0.695
ARF9
Auxin response factor 9 ; Auxin response factors (ARFs) are transcriptional factors that binds specifically to the DNA sequence 5’-TGTCTC-3’ found in the auxin-responsive promoter elements (AuxREs) (644 aa)
           
  0.623
FZY
Flavin monooxygenase-like protein (410 aa)
           
  0.519
EXPB2
Beta expansin (285 aa)
           
  0.518
IAA10
IAA17 ; Aux/IAA proteins are short-lived transcriptional factors that function as repressors of early auxin response genes at low auxin concentrations (208 aa)
           
  0.469
exp12
Expansin12 (249 aa)
           
  0.469
Your Current Organism:
Solanum lycopersicum
NCBI taxonomy Id: 4081
Other names: Lycopersicon, Lycopersicon (Mill.) Seithe, Lycopersicon esculentum, Lycopersicon esculentum Mill., Lycopersicon esculentum var. esculentum, Lycopersicon lycopersicum, S. lycopersicum, Solanum esculentum, Solanum esculentum Dunal, Solanum lycopersicum, Solanum lycopersicum L., tomato
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