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STRINGSTRING
Solyc01g079060.2.1 protein (Solanum lycopersicum) - STRING interaction network
"Solyc01g079060.2.1" - annotation not available in Solanum lycopersicum
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Solyc01g079060.2.1annotation not available (210 aa)    
Predicted Functional Partners:
101250100
annotation not available (227 aa)
     
   
  0.743
Solyc02g088780.2.1
Ribosome biogenesis protein WDR12 homolog; Required for maturation of ribosomal RNAs and formation of the large ribosomal subunit (423 aa)
       
      0.724
Solyc01g111030.1.1
Ribosome biogenesis protein WDR12 homolog; Required for maturation of ribosomal RNAs and formation of the large ribosomal subunit (470 aa)
       
      0.724
Solyc04g049720.2.1
Peptidase M1 family protein (544 aa)
           
  0.686
101259117
annotation not available (220 aa)
     
 
  0.668
101268191
annotation not available (222 aa)
     
 
  0.668
101259697
annotation not available (232 aa)
     
   
  0.654
101248200
annotation not available (234 aa)
     
   
  0.654
101265760
Uncharacterized protein; E2F/DP family winged-helix DNA-binding domain (179 aa)
     
   
  0.632
101248169
annotation not available (218 aa)
     
 
  0.621
Your Current Organism:
Solanum lycopersicum
NCBI taxonomy Id: 4081
Other names: Lycopersicon esculentum, Lycopersicon esculentum Mill., Lycopersicon esculentum var. esculentum, S. lycopersicum, Solanum esculentum, Solanum esculentum Dunal, Solanum lycopersicum, Solanum lycopersicum L., tomato
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