STRINGSTRING
Solyc01g079680.2.1 protein (Solanum lycopersicum) - STRING interaction network
"Solyc01g079680.2.1" - Uncharacterized protein in Solanum lycopersicum
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Solyc01g079680.2.1Uncharacterized protein (550 aa)    
Predicted Functional Partners:
RanBP1
Ran binding protein-1 (224 aa)
     
  0.974
Solyc06g082120.2.1
Uncharacterized protein (211 aa)
     
  0.974
Solyc06g066740.1.1
Uncharacterized protein (450 aa)
     
  0.974
Solyc03g120280.1.1
Uncharacterized protein (449 aa)
     
  0.974
Xpo1
Exportin-1 (1075 aa)
     
  0.968
Solyc01g098170.2.1
Uncharacterized protein (1199 aa)
     
  0.968
Solyc12g088680.1.1
Uncharacterized protein (160 aa)
     
  0.968
Solyc07g021660.1.1
Uncharacterized protein (138 aa)
     
  0.968
Solyc04g078620.2.1
Uncharacterized protein (160 aa)
     
  0.968
Solyc03g112720.2.1
Uncharacterized protein (149 aa)
     
  0.968
Your Current Organism:
Solanum lycopersicum
NCBI taxonomy Id: 4081
Other names: Lycopersicon, Lycopersicon (Mill.) Seithe, Lycopersicon esculentum, Lycopersicon esculentum Mill., Lycopersicon esculentum var. esculentum, Lycopersicon lycopersicum, S. lycopersicum, Solanum esculentum, Solanum esculentum Dunal, Solanum lycopersicum, Solanum lycopersicum L., tomato
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