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Solyc01g079840.2.1 protein (Solanum lycopersicum) - STRING interaction network
"Solyc01g079840.2.1" - Uncharacterized protein in Solanum lycopersicum
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query proteins and first shell of interactors
white nodes:
second shell of interactors
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proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Solyc01g079840.2.1Uncharacterized protein (448 aa)    
Predicted Functional Partners:
Solyc12g005870.1.1
NEDD8-activating enzyme E1 regulatory subunit ; Regulatory subunit of the dimeric ECR1-AXR1 E1 enzyme. E1 activates NEDD8/RUB1 by first adenylating its C-terminal glycine residue with ATP, thereafter linking this residue to the side chain of the catalytic cysteine, yielding a NEDD8-ECR1 thioester and free AMP. E1 finally transfers NEDD8 to the catalytic cysteine of RCE1 (500 aa)
     
 
  0.984
Solyc11g072460.1.1
NEDD8-activating enzyme E1 regulatory subunit ; Regulatory subunit of the dimeric ECR1-AXR1 E1 enzyme. E1 activates NEDD8/RUB1 by first adenylating its C-terminal glycine residue with ATP, thereafter linking this residue to the side chain of the catalytic cysteine, yielding a NEDD8-ECR1 thioester and free AMP. E1 finally transfers NEDD8 to the catalytic cysteine of RCE1 (537 aa)
     
 
  0.984
Solyc12g089030.1.1
Uncharacterized protein (183 aa)
     
  0.963
Solyc10g039370.1.1
Uncharacterized protein (80 aa)
     
  0.963
Solyc06g007500.1.1
Uncharacterized protein (262 aa)
     
  0.963
RCE1
RUB1 conjugating enzyme (183 aa)
     
  0.963
Solyc02g085690.2.1
Uncharacterized protein (226 aa)
     
  0.963
Solyc06g034160.2.1
Autophagy-related protein 3 (313 aa)
     
  0.938
Solyc10g005560.2.1
Ubiquitin (154 aa)
       
  0.869
Solyc11g011900.1.1
Uncharacterized protein (284 aa)
       
  0.846
Your Current Organism:
Solanum lycopersicum
NCBI taxonomy Id: 4081
Other names: Lycopersicon, Lycopersicon (Mill.) Seithe, Lycopersicon esculentum, Lycopersicon esculentum Mill., Lycopersicon esculentum var. esculentum, Lycopersicon lycopersicum, S. lycopersicum, Solanum esculentum, Solanum esculentum Dunal, Solanum lycopersicum, Solanum lycopersicum L., tomato
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