STRINGSTRING
Solyc01g080110.2.1 protein (Solanum lycopersicum) - STRING interaction network
"Solyc01g080110.2.1" - Uncharacterized protein in Solanum lycopersicum
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Solyc01g080110.2.1Uncharacterized protein (274 aa)    
Predicted Functional Partners:
Solyc08g065220.2.1
Putative glycine decarboxylase p-protein (1036 aa)
   
 
    0.568
Solyc12g009610.1.1
Uncharacterized protein (656 aa)
           
  0.545
Solyc07g008000.2.1
Uncharacterized protein (678 aa)
           
  0.545
Solyc09g091840.2.1
Cytosolic glutathione reductase (454 aa)
   
 
    0.516
GR
Chloroplast glutathione reductase (557 aa)
   
 
    0.516
Solyc12g099100.1.1
Dihydrolipoyl dehydrogenase (504 aa)
       
    0.510
LOC544237
Dihydrolipoyl dehydrogenase (500 aa)
       
    0.510
Solyc05g053100.2.1
Uncharacterized protein (571 aa)
       
    0.510
Solyc01g100360.2.1
Uncharacterized protein (570 aa)
       
    0.510
Solyc07g049740.2.1
Uncharacterized protein (452 aa)
       
 
  0.495
Your Current Organism:
Solanum lycopersicum
NCBI taxonomy Id: 4081
Other names: Lycopersicon, Lycopersicon (Mill.) Seithe, Lycopersicon esculentum, Lycopersicon esculentum Mill., Lycopersicon esculentum var. esculentum, Lycopersicon lycopersicum, S. lycopersicum, Solanum esculentum, Solanum esculentum Dunal, Solanum lycopersicum, Solanum lycopersicum L., tomato
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