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101248135 protein (Solanum lycopersicum) - STRING interaction network
"101248135" - ARM repeat superfamily protein in Solanum lycopersicum
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
101248135ARM repeat superfamily protein (296 aa)    
Predicted Functional Partners:
101265401
Uncharacterized protein; Tetratricopeptide repeat (TPR)-like superfamily protein (476 aa)
     
        0.890
101248633
End binding protein 1C (333 aa)
     
   
  0.886
101255795
Unknown protein; FUNCTIONS IN- molecular_function unknown; INVOLVED IN- biological_process unknown; LOCATED IN- chloroplast; EXPRESSED IN- 16 plant structures; EXPRESSED DURING- 9 growth stages; BEST Arabidopsis thaliana protein match is- unknown pr /.../(TAIR-AT5G01970.1); Has 3209 Blast hits to 2720 proteins in 308 species- Archae - 13; Bacteria - 213; Metazoa - 1207; Fungi - 247; Plants - 183; Viruses - 21; Other Eukaryotes - 1325 (source- NCBI BLink) (332 aa)
     
        0.886
101259500
annotation not available (349 aa)
     
        0.885
101254964
Uncharacterized protein; Haloacid dehalogenase-like hydrolase (HAD) superfamily protein (292 aa)
     
        0.882
101257469
DNA-binding HORMA family protein (208 aa)
     
   
  0.878
101268550
annotation not available (310 aa)
     
        0.877
101252290
Uncharacterized protein; Syntaxin of plants 111; Belongs to the syntaxin family (311 aa)
     
        0.877
101262334
annotation not available (499 aa)
     
        0.875
101243777
annotation not available (295 aa)
     
        0.873
Your Current Organism:
Solanum lycopersicum
NCBI taxonomy Id: 4081
Other names: Lycopersicon esculentum, Lycopersicon esculentum Mill., Lycopersicon esculentum var. esculentum, S. lycopersicum, Solanum esculentum, Solanum esculentum Dunal, Solanum lycopersicum, Solanum lycopersicum L., tomato
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