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STRINGSTRING
Solyc01g081080.1.1 protein (Solanum lycopersicum) - STRING interaction network
"Solyc01g081080.1.1" - annotation not available in Solanum lycopersicum
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Solyc01g081080.1.1annotation not available (677 aa)    
Predicted Functional Partners:
pcna
Proliferating cell nuclear antigen; This protein is an auxiliary protein of DNA polymerase delta and is involved in the control of eukaryotic DNA replication by increasing the polymerase’s processibility during elongation of the leading strand (264 aa)
   
 
  0.990
101264020
Uncharacterized protein; Replication factor C subunit 3 (357 aa)
     
 
0.985
101267918
Uncharacterized protein; Replication factor C 2 (331 aa)
     
 
0.984
101254779
AAA-type ATPase family protein (1020 aa)
     
 
  0.978
Solyc02g072090.1.1
annotation not available (1213 aa)
     
 
  0.978
101254741
annotation not available (1273 aa)
     
 
  0.978
101268250
DNA helicase; Minichromosome maintenance (MCM2/3/5) family protein; Belongs to the MCM family (787 aa)
   
 
  0.978
101259745
DNA polymerase alpha subunit B; May play an essential role at the early stage of chromosomal DNA replication by coupling the polymerase alpha/primase complex to the cellular replication machinery (617 aa)
     
 
  0.977
101268826
Uncharacterized protein; ATPase family associated with various cellular activities (AAA) (339 aa)
     
 
0.967
101267349
Uncharacterized protein; Zinc ion binding (398 aa)
     
 
  0.959
Your Current Organism:
Solanum lycopersicum
NCBI taxonomy Id: 4081
Other names: Lycopersicon esculentum, Lycopersicon esculentum Mill., Lycopersicon esculentum var. esculentum, S. lycopersicum, Solanum esculentum, Solanum esculentum Dunal, Solanum lycopersicum, Solanum lycopersicum L., tomato
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