STRINGSTRING
Solyc01g081080.1.1 protein (Solanum lycopersicum) - STRING interaction network
"Solyc01g081080.1.1" - Uncharacterized protein in Solanum lycopersicum
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Solyc01g081080.1.1Uncharacterized protein (677 aa)    
Predicted Functional Partners:
Solyc03g111680.2.1
Uncharacterized protein (1020 aa)
   
  0.998
Solyc02g072090.1.1
Uncharacterized protein (1213 aa)
   
  0.998
pcna
Proliferating cell nuclear antigen ; This protein is an auxiliary protein of DNA polymerase delta and is involved in the control of eukaryotic DNA replication by increasing the polymerase’s processibility during elongation of the leading strand (264 aa)
   
  0.997
Solyc11g012820.1.1
Uncharacterized protein (339 aa)
     
0.996
Solyc06g060150.2.1
Uncharacterized protein (357 aa)
     
0.994
Solyc08g080510.2.1
Uncharacterized protein (331 aa)
     
0.991
Solyc07g005880.2.1
Uncharacterized protein (1012 aa)
     
  0.969
Solyc06g060350.2.1
Uncharacterized protein (1252 aa)
     
  0.969
Solyc02g083600.2.1
Uncharacterized protein (599 aa)
     
  0.961
Solyc09g091650.2.1
Uncharacterized protein (999 aa)
     
 
  0.956
Your Current Organism:
Solanum lycopersicum
NCBI taxonomy Id: 4081
Other names: Lycopersicon, Lycopersicon (Mill.) Seithe, Lycopersicon esculentum, Lycopersicon esculentum Mill., Lycopersicon esculentum var. esculentum, Lycopersicon lycopersicum, S. lycopersicum, Solanum esculentum, Solanum esculentum Dunal, Solanum lycopersicum, Solanum lycopersicum L., tomato
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