STRINGSTRING
NMP1 protein (Solanum lycopersicum) - STRING interaction network
"NMP1" - Nuclear matrix protein 1 in Solanum lycopersicum
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
NMP1Nuclear matrix protein 1 (331 aa)    
Predicted Functional Partners:
MFP1
MAR-binding filament-like protein 1 ; Binds DNA. Interacts with chromatin via matrix attachment regions (MARs). Likely to participate in nuclear architecture by connecting chromatin with the nuclear matrix and potentially with the nuclear envelope (717 aa)
           
  0.752
SppS
Solanesyl diphosphate synthase (398 aa)
           
  0.699
MAN1
Mannan endo-1,4-beta-mannosidase 1 (397 aa)
           
  0.699
Solyc03g046590.2.1
Uncharacterized protein (801 aa)
           
  0.545
Solyc02g093810.2.1
Uncharacterized protein (725 aa)
           
  0.542
Solyc02g067990.2.1
Uncharacterized protein (733 aa)
           
  0.542
Solyc06g083100.1.1
Uncharacterized protein (597 aa)
           
  0.530
Solyc06g083090.2.1
Uncharacterized protein (615 aa)
           
  0.530
Solyc12g005050.1.1
Uncharacterized protein (427 aa)
           
  0.514
Solyc08g013990.2.1
Uncharacterized protein (289 aa)
           
  0.495
Your Current Organism:
Solanum lycopersicum
NCBI taxonomy Id: 4081
Other names: Lycopersicon, Lycopersicon (Mill.) Seithe, Lycopersicon esculentum, Lycopersicon esculentum Mill., Lycopersicon esculentum var. esculentum, Lycopersicon lycopersicum, S. lycopersicum, Solanum esculentum, Solanum esculentum Dunal, Solanum lycopersicum, Solanum lycopersicum L., tomato
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